STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60828.1ABC 3 transport family protein; Psort location: CytoplasmicMembrane, score: 10.00. (291 aa)    
Predicted Functional Partners:
EEZ60827.1
ABC transporter, ATP-binding protein; KEGG: azo:azo1216 1.4e-29 mntA2; putative manganese transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.994
EEZ60832.1
KEGG: sth:STH653 8.4e-25 iron ABC transporter ATP-binding protein K02013; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.974
EEZ60900.1
ABC transporter, substrate-binding protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.953
EEZ60825.1
Tat pathway signal sequence domain protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.953
EEZ60833.1
Tat pathway signal sequence domain protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.926
EEZ60824.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.802
EEZ60829.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEZ60826.1
Hypothetical protein.
       0.565
EEZ61147.1
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family; Psort location: CytoplasmicMembrane, score: 9.99.
   
  
 0.499
EEZ61136.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rco:RC0311 0.0010 barA; histidine kinase sensor protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.459
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.