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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60842.1Transcriptional regulator, AraC family; KEGG: ccr:CC2357 3.3e-39 beta-xylosidase K01198; Psort location: Cytoplasmic, score: 9.98. (813 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
     
 0.863
EEZ61002.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 2.5e-13 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; Psort location: Cytoplasmic, score: 9.98.
  
  
  0.785
EEZ60566.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 2.1e-12 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; Psort location: Cytoplasmic, score: 8.87.
  
  
  0.782
EEZ61838.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 5.0e-11 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; Psort location: Cytoplasmic, score: 8.87.
  
  
  0.781
EEZ62229.1
Transcriptional regulator, AraC family; KEGG: bce:BC3740 1.3e-11 ADA regulatory protein K00567; Psort location: Cytoplasmic, score: 8.87.
  
  
  0.768
EEZ62237.1
Transcriptional regulator, AraC family; KEGG: bca:BCE_3772 4.1e-07 adaA; Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K00567; Psort location: Cytoplasmic, score: 8.87.
  
  
  0.726
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.691
EEZ60405.1
Hydrolase, alpha/beta domain protein; KEGG: spt:SPA2232 2.6e-62 aes; acetyl esterase K01066; Psort location: Cytoplasmic, score: 9.98.
 
 
  0.674
EEZ60729.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 7.5e-08 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; Psort location: Cytoplasmic, score: 8.87.
  
  
  0.662
EEZ60841.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.565
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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