STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bukButyrate kinase; KEGG: gka:GK2380 2.6e-76 butyrate kinase K00929; Psort location: Cytoplasmic, score: 9.98; Belongs to the acetokinase family. (369 aa)    
Predicted Functional Partners:
EEZ60851.1
KEGG: cpr:CPR_1696 4.0e-57 pta; phosphate acetyltransferase K00625; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.924
EEZ60850.1
Hypothetical protein; KEGG: mth:MTH793 2.1e-28 3-ketoacyl-CoA thiolase K00632; Psort location: Cytoplasmic, score: 8.87; Belongs to the thiolase-like superfamily. Thiolase family.
 
   
 0.827
pta
Phosphate acetyltransferase; KEGG: tte:TTE1482 2.7e-90 pta; phosphotransacetylase K00625; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.770
EEZ60849.1
KEGG: bcz:BCZK3609 5.9e-06 acpA; acyl carrier protein K02078; Psort location: Cytoplasmic, score: 8.87.
       0.765
EEZ60852.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.712
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
     
 0.617
EEZ62164.1
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; KEGG: lsl:LSL_1297 1.2e-165 gdhA; NADP-specific glutamate dehydrogenase K00262; Psort location: Cytoplasmic, score: 9.98; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.610
EEZ60844.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.570
EEZ60845.1
Hydrogenase, Fe-only; KEGG: tte:TTE0894 8.1e-146 nuoG; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) K00336; Psort location: Cytoplasmic, score: 8.87.
     
 0.536
EEZ60847.1
4Fe-4S binding domain protein; KEGG: pfu:PF1767 7.8e-06 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176; Psort location: Cytoplasmic, score: 8.87.
       0.531
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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