STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60862.1Isocitrate dehydrogenase, NADP-dependent; KEGG: tte:TTE0387 2.6e-149 icd; Isocitrate dehydrogenases K00031; Psort location: Cytoplasmic, score: 8.87; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (434 aa)    
Predicted Functional Partners:
acnA
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.973
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.945
EEZ62164.1
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; KEGG: lsl:LSL_1297 1.2e-165 gdhA; NADP-specific glutamate dehydrogenase K00262; Psort location: Cytoplasmic, score: 9.98; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.905
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
  
 0.899
purB
Adenylosuccinate lyase; KEGG: lil:LA3080 3.3e-110 purB; adenylosuccinate lyase K01756; Psort location: Cytoplasmic, score: 8.87.
    
 0.878
argH
KEGG: sth:STH486 6.1e-125 argininosuccinate lyase K01755; Psort location: Cytoplasmic, score: 8.87.
     
 0.878
EEZ61149.1
KEGG: mta:Moth_1122 3.6e-111 citrate (Si)-synthase K01647; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.837
EEZ61495.1
4Fe-4S binding domain protein; KEGG: mma:MM1824 9.8e-06 formylmethanofuran dehydrogenase K00205; Psort location: Cytoplasmic, score: 8.87.
     
 0.806
EEZ61622.1
Aminotransferase, class I/II; KEGG: cac:CAC2832 8.6e-110 PLP-dependent aminotransferase K00811; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.803
EEZ61978.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cte:CT0282 1.2e-73 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.98.
   
 
 0.780
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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