Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EEZ60873.1KEGG: rha:RHA1_ro08852 0.00038 protein kinase/transcriptional regulator, LuxR family K08282; Psort location: CytoplasmicMembrane, score: 9.99. (547 aa)    
Predicted Functional Partners:
EEZ61692.1
Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
  0.788
EEZ60583.1
KEGG: ava:Ava_B0209 0.00019 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
  0.773
EEZ61951.1
KEGG: ava:Ava_B0209 0.00024 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
  0.763
EEZ60870.1
Hypothetical protein.
       0.631
thrS
threonine--tRNA ligase; KEGG: cac:CAC2362 1.1e-189 thrS; threonyl-tRNA synthetase K01868; Psort location: Cytoplasmic, score: 9.98; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.631
EEZ60872.1
Hypothetical protein.
       0.631
EEZ60869.1
Hypothetical protein; KEGG: fra:Francci3_0044 9.0e-05 serine/threonine protein kinase K08884.
       0.522
EEZ60874.1
Tat pathway signal sequence domain protein; KEGG: ldb:Ldb1112 4.2e-27 putative fumarate reductase (flavoprotein); Psort location: Cytoplasmic, score: 8.87.
       0.509
EEZ61359.1
Transcriptional regulator, LuxR family; KEGG: eci:UTI89_C3919 0.0012 malT; MalT-maltotriose-ATP transcriptional activator K03556; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 
0.456
EEZ61723.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 1.2e-05 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.97.
  
 
 
0.456
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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