STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60877.1KEGG: ava:Ava_B0029 0.00081 two component transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.97. (505 aa)    
Predicted Functional Partners:
EEZ60878.1
Hypothetical protein.
       0.773
EEZ60879.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.773
EEZ61692.1
Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.620
EEZ61821.1
Putative phage tail component domain protein; KEGG: pen:PSEEN1359 3.1e-41 gacS; GacS sensor kinase protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.617
EEZ61234.1
Histidine kinase; KEGG: bsu:BG12215 4.7e-14 yfiJ; two-component sensor histidine kinase. potential cognate response regulator is YfiK K02480; Psort location: CytoplasmicMembrane, score: 9.99.
  
  0.610
EEZ60583.1
KEGG: ava:Ava_B0209 0.00019 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.569
EEZ60528.1
KEGG: ava:Ava_B0209 0.00085 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.493
EEZ61136.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rco:RC0311 0.0010 barA; histidine kinase sensor protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.486
EEZ60876.1
FAD binding domain protein; KEGG: reh:H16_B0639 8.7e-31 3-oxosteroid 1-dehydrogenase; Psort location: Cytoplasmic, score: 8.87.
  
    0.455
EEZ60875.1
Hypothetical protein; KEGG: btl:BALH_4682 0.0056 cccB; cytochrome c-551; Psort location: Cytoplasmic, score: 8.87.
       0.453
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.