STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60887.1YhgE/Pip domain protein; KEGG: cal:orf19.4072 3.3e-07 HYR10; similar to cell surface flocculin K01186; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name. (728 aa)    
Predicted Functional Partners:
EEZ60888.1
YhgE/Pip domain protein; KEGG: cal:orf19.575 7.2e-07 HYR5; similar to HYR1 K01186; Psort location: CytoplasmicMembrane, score: 9.99; overlaps another CDS with the same product name.
 
    
0.855
EEZ60889.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00071 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.504
EEZ61498.1
Hypothetical protein; KEGG: cal:orf19.7586 1.1e-09 CHT3; chitinase 3 precursor K01183; Psort location: Extracellular, score: 9.55.
  
     0.415
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.