STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panCKEGG: cac:CAC2915 6.0e-14 panC; pantoate--beta-alanine ligase K01918; Psort location: Cytoplasmic, score: 8.87; Belongs to the pantothenate synthetase family. (56 aa)    
Predicted Functional Partners:
coaX
Pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
  
 
 0.799
EEZ60893.1
Putative CoA-substrate-specific enzyme activase; KEGG: eci:UTI89_C5044 5.1e-22 yjiL; hypothetical protein YjiL K04111; Psort location: Cytoplasmic, score: 8.87.
    
  0.627
EEZ62099.1
Flavoprotein; KEGG: ade:Adeh_2372 3.2e-39 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K01598:K01922; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.605
coaBC
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
  
 
 0.605
EEZ61685.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: fnu:FN0454 3.9e-169 aldehyde dehydrogenase B K00138; Psort location: Cytoplasmic, score: 9.98.
     
 0.583
EEZ60894.1
Hypothetical protein.
       0.568
EEZ62180.1
TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
  
    0.459
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.