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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60632.1KEGG: reh:H16_A0476 1.7e-13 predicted glutamine amidotransferase class II; Psort location: Cytoplasmic, score: 8.87. (279 aa)    
Predicted Functional Partners:
EEZ60631.1
Hypothetical protein.
       0.773
panC-2
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
       0.658
EEZ60630.1
Bile acid transporter; KEGG: mbo:Mb2676 0.0070 arsC; probable arsenic-transport integral membrane protein ArsC K03741:K03325; Psort location: CytoplasmicMembrane, score: 9.99.
       0.658
EEZ60633.1
Cation diffusion facilitator family transporter; KEGG: mth:MTH1893 6.2e-36 zinC; cation efflux system protein (zinc/cadmium) K01529; Psort location: CytoplasmicMembrane, score: 7.63.
 
     0.573
sufS
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
 0.507
EEZ60629.1
Hypothetical protein.
       0.493
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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