STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60615.1Phosphotransferase enzyme family; KEGG: fnu:FN1237 7.8e-45 choline kinase K00866:K00968; Psort location: Cytoplasmic, score: 8.87. (593 aa)    
Predicted Functional Partners:
EEZ60614.1
ErfK/YbiS/YcfS/YnhG; KEGG: spn:SP_0965 2.9e-27 endo-beta-N-acetylglucosaminidase K01227; Psort location: Extracellular, score: 9.55.
 
     0.827
EEZ60616.1
Cell wall-binding repeat protein; KEGG: lsl:LSL_1516 8.5e-19 N-acetylmuramoyl-L-alanine amidase K01446; Psort location: Extracellular, score: 9.55.
 
    0.826
EEZ60617.1
Cell wall-binding repeat protein; KEGG: spr:spr1754 2.6e-16 lytA; autolysin (N-acetylmuramoyl-L-alanine amidase) K01446; Psort location: Extracellular, score: 9.55.
 
     0.764
EEZ60624.1
KEGG: cpf:CPF_0917 1.6e-15 LicD family protein K07271; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.737
EEZ60619.1
LICD family protein; KEGG: lpl:lp_0844 3.0e-29 licD; lipopolysaccharide biosynthesis protein LicD K07271; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.719
EEZ60611.1
Putative membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.713
EEZ61844.1
Cell wall-binding repeat protein; KEGG: spr:spr1754 7.1e-28 lytA; autolysin (N-acetylmuramoyl-L-alanine amidase) K01446; Psort location: Extracellular, score: 9.55.
 
     0.652
EEZ60625.1
NlpC/P60 family protein; KEGG: spd:SPD_0853 7.9e-22 lytB; endo-beta-N-acetylglucosaminidase precursor, putative K01227; Psort location: Extracellular, score: 9.55.
 
     0.633
EEZ60279.1
Cell wall-binding repeat protein; KEGG: spn:SP_0965 4.6e-20 endo-beta-N-acetylglucosaminidase K01227; Psort location: Extracellular, score: 9.55.
  
    0.627
EEZ60278.1
Cell wall-binding repeat protein; KEGG: lsl:LSL_1516 4.6e-21 N-acetylmuramoyl-L-alanine amidase K01446; Psort location: Extracellular, score: 9.55.
 
     0.618
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.