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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60621.1Putative chlorophyll synthesis pathway protein BchC; KEGG: hso:HS_1141 1.1e-59 gatD; galactitol-1-phosphate dehydrogenase K00094; Psort location: Cytoplasmic, score: 9.98. (350 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
    
 0.944
EEZ60620.1
Tagatose-6-phosphate kinase; KEGG: sco:SCO5848 2.2e-88 agaZ; tagatose 6-phosphate kinase K00917; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.821
EEZ61685.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: fnu:FN0454 3.9e-169 aldehyde dehydrogenase B K00138; Psort location: Cytoplasmic, score: 9.98.
  
 0.749
EEZ61004.1
GroES-like protein; KEGG: tte:TTE0695 3.5e-129 tdh; Threonine dehydrogenase and related Zn-dependent dehydrogenases K00100; Psort location: Cytoplasmic, score: 9.65.
  
  
 
0.727
EEZ61978.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cte:CT0282 1.2e-73 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.98.
 
  
  0.711
EEZ61789.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: rha:RHA1_ro02344 3.1e-41 3-oxoacyl-[acyl-carrier-protein] reductase K00059; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.701
EEZ60622.1
KEGG: efa:EF2172 2.1e-19 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.683
EEZ60619.1
LICD family protein; KEGG: lpl:lp_0844 3.0e-29 licD; lipopolysaccharide biosynthesis protein LicD K07271; Psort location: Cytoplasmic, score: 8.87.
       0.682
EEZ61053.1
Putative glucose-6-phosphate isomerase; KEGG: rpc:RPC_3670 1.2e-71 transaldolase K00616:K01810; Psort location: Cytoplasmic, score: 9.98.
   
 0.671
gap
KEGG: mta:Moth_0262 1.4e-107 glyceraldehyde-3-phosphate dehydrogenase, type I K00134; Psort location: Cytoplasmic, score: 9.98.
   
 
 0.668
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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