STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60624.1KEGG: cpf:CPF_0917 1.6e-15 LicD family protein K07271; Psort location: Cytoplasmic, score: 8.87. (543 aa)    
Predicted Functional Partners:
EEZ60622.1
KEGG: efa:EF2172 2.1e-19 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.773
EEZ60623.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEZ60626.1
Phosphotransferase enzyme family; KEGG: fnu:FN1237 5.3e-24 choline kinase K00866:K00968; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.744
EEZ60615.1
Phosphotransferase enzyme family; KEGG: fnu:FN1237 7.8e-45 choline kinase K00866:K00968; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.737
EEZ60612.1
Phosphotransferase enzyme family; KEGG: fnu:FN1237 3.7e-54 choline kinase K00866:K00968; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.733
EEZ60625.1
NlpC/P60 family protein; KEGG: spd:SPD_0853 7.9e-22 lytB; endo-beta-N-acetylglucosaminidase precursor, putative K01227; Psort location: Extracellular, score: 9.55.
 
     0.694
EEZ60619.1
LICD family protein; KEGG: lpl:lp_0844 3.0e-29 licD; lipopolysaccharide biosynthesis protein LicD K07271; Psort location: Cytoplasmic, score: 8.87.
 
    
0.644
EEZ60621.1
Putative chlorophyll synthesis pathway protein BchC; KEGG: hso:HS_1141 1.1e-59 gatD; galactitol-1-phosphate dehydrogenase K00094; Psort location: Cytoplasmic, score: 9.98.
 
     0.607
EEZ60620.1
Tagatose-6-phosphate kinase; KEGG: sco:SCO5848 2.2e-88 agaZ; tagatose 6-phosphate kinase K00917; Psort location: Cytoplasmic, score: 8.87.
       0.551
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.