STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60281.1CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: lwe:lwe1065 1.8e-12 tagB; teichoic acid biosynthesis protein B K01005; Psort location: Cytoplasmic, score: 8.87. (438 aa)    
Predicted Functional Partners:
EEZ60280.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: lwe:lwe1065 1.8e-31 tagB; teichoic acid biosynthesis protein B K01005; Psort location: Cytoplasmic, score: 8.87.
 
    
0.841
EEZ60282.1
GroES-like protein; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate.
 
  
 0.742
EEZ61336.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.700
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the transfer of the cytidylyl group of CTP to D- ribitol 5-phosphate; Belongs to the IspD/TarI cytidylyltransferase family. TarI subfamily.
 
  
 0.646
EEZ61335.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_A3976 3.1e-50 ABC polysaccharide/polyol phosphate export pump, ATPase subunit K01990; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.576
EEZ60619.1
LICD family protein; KEGG: lpl:lp_0844 3.0e-29 licD; lipopolysaccharide biosynthesis protein LicD K07271; Psort location: Cytoplasmic, score: 8.87.
 
     0.470
EEZ60279.1
Cell wall-binding repeat protein; KEGG: spn:SP_0965 4.6e-20 endo-beta-N-acetylglucosaminidase K01227; Psort location: Extracellular, score: 9.55.
       0.427
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.