STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60282.1GroES-like protein; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate. (341 aa)    
Predicted Functional Partners:
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the transfer of the cytidylyl group of CTP to D- ribitol 5-phosphate; Belongs to the IspD/TarI cytidylyltransferase family. TarI subfamily.
 
 
 0.979
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
    
 0.944
EEZ60280.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: lwe:lwe1065 1.8e-31 tagB; teichoic acid biosynthesis protein B K01005; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.769
EEZ60281.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: lwe:lwe1065 1.8e-12 tagB; teichoic acid biosynthesis protein B K01005; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.742
EEZ61978.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cte:CT0282 1.2e-73 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.98.
    
  0.674
rpe
KEGG: ade:Adeh_3971 5.4e-46 ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.640
EEZ60622.1
KEGG: efa:EF2172 2.1e-19 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.595
EEZ60284.1
Endonuclease/exonuclease/phosphatase family protein; Psort location: Cytoplasmic, score: 8.87.
       0.533
rpiB
KEGG: plt:Plut_1017 5.0e-34 ribose/galactose isomerase K01808; Psort location: Cytoplasmic, score: 8.87.
  
 
  0.506
ispD-2
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
 
 
 0.455
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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