STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60295.1Transcriptional regulator, Rrf2 family; KEGG: ama:AM656 5.0e-11 aminotransferase, class V K04487; Psort location: Cytoplasmic, score: 8.87. (168 aa)    
Predicted Functional Partners:
cysK
Cysteine synthase A; KEGG: bfr:BF4576 2.4e-107 cysteine synthase A K01738; Psort location: Cytoplasmic, score: 8.87; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.574
EEZ62028.1
Aminotransferase, class V; KEGG: fal:FRAAL5862 1.6e-76 iscS; cysteine desulfurase K04487; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.555
EEZ61665.1
Aminotransferase, class V; KEGG: mta:Moth_0199 2.2e-56 aminotransferase, class V K04487; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.555
EEZ60532.1
KEGG: tte:TTE2465 4.0e-89 nifS2; cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.555
trmU
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
  
  
 0.431
EEZ60293.1
Hypothetical protein; KEGG: cyb:CYB_1648 8.2e-06 aminotransferase, class V K04487.
       0.419
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.