STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60299.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (429 aa)    
Predicted Functional Partners:
EEZ60298.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.872
EEZ60973.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.522
EEZ60766.1
Toxin-antitoxin system, toxin component, PIN family.
  
     0.482
EEZ61054.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.480
EEZ61383.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.444
nrdG
Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
       0.440
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.