STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60315.1Bacterial FdrA protein; KEGG: cch:Cag_0466 2.4e-12 succinyl-CoA ligase, alpha subunit K01902; Psort location: Cytoplasmic, score: 8.87. (488 aa)    
Predicted Functional Partners:
EEZ60314.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
     0.995
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.962
EEZ61196.1
KEGG: mth:MTH1850 2.9e-31 fumarate reductase iron-sulfur protein K00245; Psort location: Cytoplasmic, score: 9.36; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 0.914
EEZ60311.1
Hypothetical protein; KEGG: reu:Reut_A0447 0.0014 enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase, C-terminal:3-hydroxyacyl-CoA dehydrogenase, NAD-binding K00022; Psort location: Cytoplasmic, score: 8.87.
 
   0.884
EEZ60769.1
KEGG: lla:L137630 4.3e-108 frdC; fumarate reductase flavoprotein subunit K00244; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 0.836
accB
acetyl-CoA carboxylase, biotin carboxyl carrier protein; KEGG: chy:CHY_1999 6.1e-164 oadA; oxaloacetate decarboxylase, alpha subunit K01571; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.831
EEZ60313.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.801
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
    
 0.761
EEZ61175.1
Purine catabolism regulatory protein-like family; Psort location: Cytoplasmic, score: 8.87.
 
     0.757
EEZ61149.1
KEGG: mta:Moth_1122 3.6e-111 citrate (Si)-synthase K01647; Psort location: Cytoplasmic, score: 9.98.
  
 0.755
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.