STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60318.1Transporter, major facilitator family protein; KEGG: sme:SMc01780 0.0050 rrpP; probable H+ translocating pyrophosphate synthase transmembrane protein K01507; Psort location: CytoplasmicMembrane, score: 10.00. (418 aa)    
Predicted Functional Partners:
EEZ61792.1
Putative ATP synthase F0, A subunit; KEGG: gsu:GSU3029 3.4e-07 long-chain-fatty-acid--[acyl-carrier-protein] ligase / acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase K05939:K01909; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.659
allS
HTH-type transcriptional activator AllS; KEGG: shn:Shewana3_3435 1.2e-05 transcriptional regulator, LysR family K06022; Belongs to the LysR transcriptional regulatory family.
 
     0.616
EEZ60401.1
Transporter, major facilitator family protein; KEGG: cal:orf19.4384 2.0e-19 HXT10; fructose symporter K01804; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.511
EEZ60319.1
Hypothetical protein.
       0.416
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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