STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60369.1KEGG: hpa:HPAG1_0538 2.3e-06 acyl carrier protein K01162; Psort location: Cytoplasmic, score: 8.87. (73 aa)    
Predicted Functional Partners:
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
  
 0.998
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
 0.990
EEZ62092.1
Hypothetical protein; KEGG: eci:UTI89_C0735 0.00049 tolA; membrane spanning protein TolA K03646; Psort location: Cytoplasmic, score: 8.87.
  
 0.915
EEZ61782.1
Condensation domain protein; KEGG: bur:Bcep18194_B0672 2.7e-28 non-ribosomal peptide synthetase modules K01776; Psort location: Cytoplasmic, score: 8.87.
  
 0.899
EEZ60663.1
Putative [acyl-carrier-protein] S-malonyltransferase; KEGG: stl:stu0386 2.1e-42 fabD; malonyl CoA-ACP transacylase K00645; Psort location: Cytoplasmic, score: 8.87.
  
 0.897
EEZ61978.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cte:CT0282 1.2e-73 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.98.
   
 0.888
EEZ61785.1
AMP-binding enzyme; KEGG: rpb:RPB_0580 6.6e-15 AMP-dependent synthetase and ligase K01897; Psort location: Cytoplasmic, score: 8.87.
  
 0.884
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
 
 0.830
EEZ61676.1
NADH dehydrogenase; KEGG: eca:ECA1245 1.8e-70 hyfC; hydrogenase-4 component C; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.811
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
   
 
 0.809
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.