STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60398.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (77 aa)    
Predicted Functional Partners:
EEZ60399.1
KEGG: dvu:DVU3332 6.2e-139 heavy metal translocating P-type ATPase; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.661
EEZ61119.1
Hypothetical protein; KEGG: sco:SCO1554 2.9e-13 SCL11.10c; putative nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K04719; Psort location: Cellwall, score: 8.93.
  
     0.599
EEZ61071.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.574
EEZ61112.1
FMN-binding domain protein; KEGG: lac:LBA1411 0.0011 fumarate reductase flavoprotein subunit K00238.
  
     0.519
EEZ62288.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 2.5e-07 serine/threonine protein kinase with TPR repeats K00908.
  
     0.514
EEZ60578.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.514
EEZ61624.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.485
EEZ61641.1
Transcriptional regulator, LysR family.
  
     0.478
EEZ60704.1
Hypothetical protein; KEGG: rso:RSc2990 0.00062 dsbD, RS01128; probable thiol:disulfide interchange transmembrane protein K04084; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.475
EEZ61884.1
Bacterial transcriptional activator domain protein; KEGG: rle:RL3062 0.00099 cya3; putative adenylate cyclase K01768; Psort location: Cytoplasmic, score: 8.87.
  
     0.455
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.