STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60403.1CoA-transferase family III protein; KEGG: ecs:ECs0041 1.7e-90 crotonobetainyl-CoA:carnitine CoA-transferase K08298; Psort location: Cytoplasmic, score: 9.98; Belongs to the CoA-transferase III family. (403 aa)    
Predicted Functional Partners:
caiA
KEGG: ecc:c0048 3.1e-128 caiA; crotonobetainyl-CoA dehydrogenase K08297; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.885
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
    
  0.832
EEZ60402.1
KEGG: spt:SPA0072 7.8e-109 caiC; probable crotonobetaine/carnitine-CoA ligase K02182; Psort location: Cytoplasmic, score: 9.98.
 
   
 0.785
EEZ60728.1
MaoC-like protein; KEGG: mtu:Rv3389c 8.7e-30 possible dehydrogenase; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.729
EEZ60405.1
Hydrolase, alpha/beta domain protein; KEGG: spt:SPA2232 2.6e-62 aes; acetyl esterase K01066; Psort location: Cytoplasmic, score: 9.98.
 
    0.726
EEZ60939.1
acyl-CoA dehydrogenase, C-terminal domain protein; KEGG: eci:UTI89_C1887 4.7e-86 ydiO; hypothetical protein YdiO K00249; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.701
EEZ60406.1
Transporter, major facilitator family protein; KEGG: bcz:BCZK2057 0.0051 macrolide efflux protein K00953; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.663
EEZ60945.1
acyl-CoA dehydrogenase, C-terminal domain protein; KEGG: eci:UTI89_C1887 1.5e-43 ydiO; hypothetical protein YdiO K00249; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.643
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
    
 0.626
EEZ60401.1
Transporter, major facilitator family protein; KEGG: cal:orf19.4384 2.0e-19 HXT10; fructose symporter K01804; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.614
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.