STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
caiAKEGG: ecc:c0048 3.1e-128 caiA; crotonobetainyl-CoA dehydrogenase K08297; Psort location: Cytoplasmic, score: 8.87. (382 aa)    
Predicted Functional Partners:
etfA
Electron transfer flavoprotein FAD-binding domain protein; KEGG: fnu:FN1424 1.4e-24 acyl-CoA dehydrogenase, short-chain specific K00248.
 0.995
EEZ60940.1
Electron transfer flavoprotein domain protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.954
EEZ60411.1
enoyl-CoA hydratase/isomerase family protein; KEGG: msm:MSMEG_5198 1.2e-46 carnitinyl-CoA dehydratase K01726; Psort location: Cytoplasmic, score: 8.87.
 
 0.946
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.943
EEZ60403.1
CoA-transferase family III protein; KEGG: ecs:ECs0041 1.7e-90 crotonobetainyl-CoA:carnitine CoA-transferase K08298; Psort location: Cytoplasmic, score: 9.98; Belongs to the CoA-transferase III family.
 
 
 0.885
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.873
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.851
EEZ60850.1
Hypothetical protein; KEGG: mth:MTH793 2.1e-28 3-ketoacyl-CoA thiolase K00632; Psort location: Cytoplasmic, score: 8.87; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.823
EEZ61124.1
Rubrerythrin; KEGG: cpr:CPR_0938 4.6e-20 periplasmic [Fe] hydrogenase 1 K00532; Psort location: Cytoplasmic, score: 8.87.
    
 0.822
EEZ60838.1
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein; KEGG: dra:DRA0143 2.8e-65 3-hydroxyacyl-CoA dehydrogenase, putative K00022.
 
 0.813
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.