STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60426.1Tat pathway signal sequence domain protein; KEGG: cal:orf19.2859 5.4e-11 SRP40; nonribosomal protein of the nucleolus and coiled bodies K01186; Psort location: Extracellular, score: 9.55. (426 aa)    
Predicted Functional Partners:
EEZ60427.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEZ60428.1
Tat pathway signal sequence domain protein; KEGG: rha:RHA1_ro11285 1.9e-12 probable peptidase K01423; Psort location: Extracellular, score: 9.55.
 
  
0.748
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.659
EEZ61878.1
Efflux ABC transporter, permease protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.622
EEZ61615.1
Efflux ABC transporter, permease protein; KEGG: bur:Bcep18194_B0724 0.0017 hypothetical protein K06020; Psort location: CytoplasmicMembrane, score: 7.63.
 
  
 0.583
EEZ60429.1
Putative peptidoglycan binding domain protein; KEGG: cjk:jk2095 2.1e-09 cwlM; N-acetylmuramoyl-L-alanine amidase K01448; Psort location: Cytoplasmic, score: 8.87.
     
 0.548
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.516
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
  
 0.505
EEZ61182.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: tfu:Tfu_3064 4.1e-71 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
  
 0.489
EEZ61940.1
ErfK/YbiS/YcfS/YnhG.
 
   
 0.485
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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