EEZ60445.1 protein (Slackia exigua) - STRING interaction network

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Score

EEZ60445.1

Hypothetical protein. (50 aa)

Predicted Functional Partners:

rpmJ

0.539

rpsM

0.499

rpsK

0.489

rpsD

0.456

rpoA

0.400

Your Current Organism:

Slackia exigua

NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEZ60445.1	rpmJ	HMPREF0762_01924	HMPREF0762_01923	Hypothetical protein.	Ribosomal protein L36; Psort location: Extracellular, score: 8.82; Belongs to the bacterial ribosomal protein bL36 family.	0.539
EEZ60445.1	rpoA	HMPREF0762_01924	HMPREF0762_01919	Hypothetical protein.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.400
EEZ60445.1	rpsD	HMPREF0762_01924	HMPREF0762_01920	Hypothetical protein.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.456
EEZ60445.1	rpsK	HMPREF0762_01924	HMPREF0762_01921	Hypothetical protein.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.489
EEZ60445.1	rpsM	HMPREF0762_01924	HMPREF0762_01922	Hypothetical protein.	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.499
rpmJ	EEZ60445.1	HMPREF0762_01923	HMPREF0762_01924	Ribosomal protein L36; Psort location: Extracellular, score: 8.82; Belongs to the bacterial ribosomal protein bL36 family.	Hypothetical protein.	0.539
rpmJ	rpoA	HMPREF0762_01923	HMPREF0762_01919	Ribosomal protein L36; Psort location: Extracellular, score: 8.82; Belongs to the bacterial ribosomal protein bL36 family.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.920
rpmJ	rpsD	HMPREF0762_01923	HMPREF0762_01920	Ribosomal protein L36; Psort location: Extracellular, score: 8.82; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.992
rpmJ	rpsK	HMPREF0762_01923	HMPREF0762_01921	Ribosomal protein L36; Psort location: Extracellular, score: 8.82; Belongs to the bacterial ribosomal protein bL36 family.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.993
rpmJ	rpsM	HMPREF0762_01923	HMPREF0762_01922	Ribosomal protein L36; Psort location: Extracellular, score: 8.82; Belongs to the bacterial ribosomal protein bL36 family.	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.992
rpoA	EEZ60445.1	HMPREF0762_01919	HMPREF0762_01924	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Hypothetical protein.	0.400
rpoA	rpmJ	HMPREF0762_01919	HMPREF0762_01923	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Ribosomal protein L36; Psort location: Extracellular, score: 8.82; Belongs to the bacterial ribosomal protein bL36 family.	0.920
rpoA	rpsD	HMPREF0762_01919	HMPREF0762_01920	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.991
rpoA	rpsK	HMPREF0762_01919	HMPREF0762_01921	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.997
rpoA	rpsM	HMPREF0762_01919	HMPREF0762_01922	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.990
rpsD	EEZ60445.1	HMPREF0762_01920	HMPREF0762_01924	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Hypothetical protein.	0.456
rpsD	rpmJ	HMPREF0762_01920	HMPREF0762_01923	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal protein L36; Psort location: Extracellular, score: 8.82; Belongs to the bacterial ribosomal protein bL36 family.	0.992
rpsD	rpoA	HMPREF0762_01920	HMPREF0762_01919	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.991
rpsD	rpsK	HMPREF0762_01920	HMPREF0762_01921	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.999
rpsD	rpsM	HMPREF0762_01920	HMPREF0762_01922	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.999