STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60460.1Hypothetical protein; Psort location: Extracellular, score: 8.82. (40 aa)    
Predicted Functional Partners:
EEZ60461.1
Efflux transporter, RND family, MFP subunit; KEGG: abo:ABO_0623 6.5e-05 aceF; pyruvate dehydrogenase, E2 component K00627.
       0.551
EEZ60462.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL6466 4.3e-60 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; Psort location: CytoplasmicMembrane, score: 10.00.
       0.540
EEZ60463.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 4.9e-52 ATPase K06020; Psort location: CytoplasmicMembrane, score: 10.00.
       0.540
EEZ60459.1
KEGG: spt:SPA1834 1.6e-170 dmsA; anaerobic dimethyl sulfoxide reductase chain A K07306; Psort location: Cytoplasmic, score: 8.87; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.493
EEZ60458.1
KEGG: dsy:DSY0187 1.3e-44 dmsB; putative anaerobic DMSO reductase chain B iron-sulfur subunit K00369; Psort location: Cytoplasmic, score: 9.98.
       0.475
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.