STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60480.1Metallo-beta-lactamase domain protein; KEGG: sat:SYN_02709 1.8e-29 hydroxyacylglutathione hydrolase W K01069; Psort location: Cytoplasmic, score: 8.87. (215 aa)    
Predicted Functional Partners:
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
   
 0.755
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
   
 0.686
relA
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
  0.679
EEZ60491.1
FAD binding domain protein; KEGG: mbu:Mbur_2437 7.7e-44 protein of unknown function DUF224 K08263; Psort location: Cytoplasmic, score: 9.98.
    
 0.649
EEZ61785.1
AMP-binding enzyme; KEGG: rpb:RPB_0580 6.6e-15 AMP-dependent synthetase and ligase K01897; Psort location: Cytoplasmic, score: 8.87.
 
 
 
 0.614
recJ
KEGG: tte:TTE1191 5.3e-94 recJ; Single-stranded DNA-specific exonuclease K07462; Psort location: Cytoplasmic, score: 8.87.
  
    0.542
EEZ61303.1
Rhodanese-like protein; KEGG: azo:azo2810 8.8e-14 conserved hypothetical protein K01010; Psort location: Cytoplasmic, score: 8.87.
  
 0.540
EEZ60412.1
Rhodanese-like protein; KEGG: nph:NP4004A 1.2e-07 nirA_3; probable ferredoxin--nitrite reductase 3 K00366; Psort location: Cytoplasmic, score: 8.87.
  
 0.540
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
 
 0.449
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.441
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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