STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
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[Homology]
Score
prsRibose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (318 aa)    
Predicted Functional Partners:
EEZ62004.1
FAD dependent oxidoreductase; KEGG: ctc:CTC02436 2.6e-101 glycerol-3-phosphate dehydrogenase K00111; Psort location: Cytoplasmic, score: 8.87.
   
 0.980
EEZ60650.1
Hypothetical protein; KEGG: swo:Swol_1770 3.4e-21 histidine--tRNA ligase K01891; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.922
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
  
 0.920
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
 
  
 0.916
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
 
 0.907
rpiB
KEGG: plt:Plut_1017 5.0e-34 ribose/galactose isomerase K01808; Psort location: Cytoplasmic, score: 8.87.
    
 0.907
EEZ60333.1
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; KEGG: cpr:CPR_1841 3.3e-110 phosphomannomutase K01840; Psort location: Cytoplasmic, score: 8.87.
  
 0.905
EEZ61734.1
Hydrolase, NUDIX family; KEGG: bha:BH1524 6.7e-13 ADP-ribose pyrophosphatase, putative K01515; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.893
EEZ61880.1
Transketolase, pyridine binding domain protein; KEGG: pca:Pcar_2719 6.4e-82 transketolase, C-terminal subunit K00615; Psort location: Cytoplasmic, score: 8.87.
    
  0.888
EEZ61881.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: mta:Moth_0236 3.9e-82 transketolase-like K00615; Psort location: Cytoplasmic, score: 8.87.
    
  0.888
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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