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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60522.1Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type; KEGG: ctc:CTC02562 7.9e-84 fumarate hydratase subunit A K01677; Psort location: Cytoplasmic, score: 8.87; overlaps another CDS with the same product name. (281 aa)    
Predicted Functional Partners:
EEZ60521.1
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type; KEGG: chy:CHY_0062 4.1e-55 fumarate hydratase K01678; Psort location: Cytoplasmic, score: 8.87; overlaps another CDS with the same product name.
 
 0.999
EEZ61149.1
KEGG: mta:Moth_1122 3.6e-111 citrate (Si)-synthase K01647; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.923
EEZ61196.1
KEGG: mth:MTH1850 2.9e-31 fumarate reductase iron-sulfur protein K00245; Psort location: Cytoplasmic, score: 9.36; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.923
EEZ60370.1
Malic enzyme, NAD binding domain protein; KEGG: bcl:ABC2723 4.3e-131 malic enzyme K00027; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.907
accB
acetyl-CoA carboxylase, biotin carboxyl carrier protein; KEGG: chy:CHY_1999 6.1e-164 oadA; oxaloacetate decarboxylase, alpha subunit K01571; Psort location: Cytoplasmic, score: 8.87.
    
 0.901
argH
KEGG: sth:STH486 6.1e-125 argininosuccinate lyase K01755; Psort location: Cytoplasmic, score: 8.87.
    
  0.878
EEZ60769.1
KEGG: lla:L137630 4.3e-108 frdC; fumarate reductase flavoprotein subunit K00244; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.859
EEZ61649.1
Tat pathway signal sequence domain protein; KEGG: ldb:Ldb1112 1.8e-34 putative fumarate reductase (flavoprotein); Psort location: Cytoplasmic, score: 8.87.
   
 
  0.823
EEZ61978.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cte:CT0282 1.2e-73 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.98.
   
 
 0.818
EEZ61158.1
Tat pathway signal sequence domain protein; KEGG: ldb:Ldb1112 8.7e-29 putative fumarate reductase (flavoprotein).
   
 
  0.805
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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