STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60528.1KEGG: ava:Ava_B0209 0.00085 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99. (508 aa)    
Predicted Functional Partners:
EEZ60529.1
Hypothetical protein; KEGG: atc:AGR_C_1094 0.0019 non-motile and phage-resistance protein K07716; Psort location: Cytoplasmic, score: 8.87.
 
     0.797
EEZ61617.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.773
EEZ61119.1
Hypothetical protein; KEGG: sco:SCO1554 2.9e-13 SCL11.10c; putative nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K04719; Psort location: Cellwall, score: 8.93.
  
     0.762
EEZ60748.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
  
     0.750
EEZ62015.1
4Fe-4S binding domain protein; KEGG: mka:MK0307 4.3e-09 fwdF_1; probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing K00205; Psort location: Cytoplasmic, score: 8.87.
  
     0.704
EEZ60578.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.700
EEZ61109.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00043 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.688
EEZ61821.1
Putative phage tail component domain protein; KEGG: pen:PSEEN1359 3.1e-41 gacS; GacS sensor kinase protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.678
EEZ61692.1
Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.678
EEZ60286.1
Hypothetical protein; KEGG: cal:orf19.4334 9.6e-16 hypothetical protein K00960; Psort location: CytoplasmicMembrane, score: 8.80.
  
    0.669
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.