STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60529.1Hypothetical protein; KEGG: atc:AGR_C_1094 0.0019 non-motile and phage-resistance protein K07716; Psort location: Cytoplasmic, score: 8.87. (330 aa)    
Predicted Functional Partners:
EEZ60533.1
Aldehyde ferredoxin oxidoreductase, tungsten cofactor-binding domain protein; KEGG: eci:UTI89_C1865 4.2e-197 ydhV; hypothetical protein YdhV K03738; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.878
EEZ60528.1
KEGG: ava:Ava_B0209 0.00085 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.797
EEZ61617.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.720
EEZ60904.1
Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.679
EEZ61488.1
Hypothetical protein; KEGG: eci:UTI89_C0969 3.6e-24 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.666
EEZ60748.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
  
     0.665
EEZ60531.1
NifU-like N-terminal domain protein; KEGG: rxy:Rxyl_1354 0.00011 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566; Psort location: Cytoplasmic, score: 8.87.
 
     0.627
EEZ62015.1
4Fe-4S binding domain protein; KEGG: mka:MK0307 4.3e-09 fwdF_1; probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing K00205; Psort location: Cytoplasmic, score: 8.87.
  
     0.602
EEZ61584.1
FMN-binding domain protein; KEGG: ctc:CTC01847 1.0e-07 fumarate reductase flavoprotein subunit K00244.
  
     0.599
EEZ61702.1
KEGG: ava:Ava_B0209 0.0013 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.587
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.