STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60533.1Aldehyde ferredoxin oxidoreductase, tungsten cofactor-binding domain protein; KEGG: eci:UTI89_C1865 4.2e-197 ydhV; hypothetical protein YdhV K03738; Psort location: Cytoplasmic, score: 8.87. (704 aa)    
Predicted Functional Partners:
EEZ60534.1
4Fe-4S binding domain protein; KEGG: eci:UTI89_C1866 2.0e-39 ydhY; putative ferredoxin-like protein YdhY K00199; Psort location: Cytoplasmic, score: 9.98.
 
  0.930
EEZ60529.1
Hypothetical protein; KEGG: atc:AGR_C_1094 0.0019 non-motile and phage-resistance protein K07716; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.878
EEZ61678.1
4Fe-4S binding domain protein; KEGG: ecj:JW2466 5.3e-23 hyfA; hydrogenase 4, 4Fe-4S subunit.
 
 
 
 0.750
EEZ60536.1
4Fe-4S binding domain protein; KEGG: afu:AF2385 1.3e-44 molybdopterin oxidoreductase, iron-sulfur binding subunit K00184; Psort location: Cytoplasmic, score: 9.65.
  
  0.731
EEZ61584.1
FMN-binding domain protein; KEGG: ctc:CTC01847 1.0e-07 fumarate reductase flavoprotein subunit K00244.
  
     0.707
EEZ61680.1
4Fe-4S binding domain protein; KEGG: eci:UTI89_C3075 5.6e-35 hydN; electron transport protein HydN K05796; Psort location: Cytoplasmic, score: 9.98.
   
 
 0.698
EEZ60537.1
Polysulfide reductase, NrfD; KEGG: afu:AF2386 5.4e-30 molybdopterin oxidoreductase, membrane subunit K00185; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.637
EEZ61309.1
KEGG: eci:UTI89_C2483 6.5e-41 napG; ferredoxin-type protein, subunit of nitrate reductase, periplasmic K02573; Psort location: Cytoplasmic, score: 8.87.
  
  0.606
EEZ61729.1
4Fe-4S binding domain protein; KEGG: hal:VNG0830G 6.0e-31 hmoA; molybdopterin oxidoreductase, iron-sulfur binding subunit K00184; Psort location: Cytoplasmic, score: 9.98.
  
  0.561
EEZ61112.1
FMN-binding domain protein; KEGG: lac:LBA1411 0.0011 fumarate reductase flavoprotein subunit K00238.
  
     0.555
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.