Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EEZ60538.1Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87. (205 aa)    
Predicted Functional Partners:
EEZ60539.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.895
EEZ60540.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.842
EEZ61836.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.709
EEZ60541.1
KEGG: ypk:y0234 2.8e-33 ATP-binding protein of ABC transporter K02056; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.683
EEZ60714.1
Conserved hypothetical protein TIGR02185; KEGG: fth:FTH_0189 0.0021 cyoD; cytochrome o ubiquinol oxidase subunit IV K00424; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.598
EEZ62228.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.565
EEZ60964.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.547
EEZ62236.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.541
EEZ60542.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
 
    
0.537
EEZ60543.1
Hypothetical protein.
 
     0.535
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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