STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60539.1Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99. (199 aa)    
Predicted Functional Partners:
EEZ60540.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.946
EEZ60541.1
KEGG: ypk:y0234 2.8e-33 ATP-binding protein of ABC transporter K02056; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.934
EEZ60538.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
 
     0.895
EEZ60963.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.771
EEZ62235.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.752
EEZ61300.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.97.
  
     0.751
EEZ60543.1
Hypothetical protein.
 
     0.751
EEZ61001.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.733
EEZ62225.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.730
EEZ60715.1
KEGG: bpm:BURPS1710b_A2293 0.0016 TetR-family regulatory protein K00356; Psort location: Cytoplasmic, score: 8.87.
  
     0.727
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.