STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60542.1Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87. (212 aa)    
Predicted Functional Partners:
EEZ60543.1
Hypothetical protein.
 
     0.826
EEZ61767.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
  
     0.726
EEZ60539.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.667
EEZ60540.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.579
EEZ60538.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
 
    
0.537
EEZ60767.1
Hypothetical protein; KEGG: fnu:FN0984 1.3e-69 tetracenomycin polyketide synthesis O-methyltransferase TcmP K00599.
  
     0.491
EEZ60541.1
KEGG: ypk:y0234 2.8e-33 ATP-binding protein of ABC transporter K02056; Psort location: CytoplasmicMembrane, score: 9.49.
       0.452
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
      
 0.424
EEZ61836.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.405
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.