STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60543.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
EEZ60542.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
 
     0.826
EEZ60539.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.751
EEZ60540.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.669
EEZ60541.1
KEGG: ypk:y0234 2.8e-33 ATP-binding protein of ABC transporter K02056; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.541
EEZ60538.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
 
     0.536
EEZ60767.1
Hypothetical protein; KEGG: fnu:FN0984 1.3e-69 tetracenomycin polyketide synthesis O-methyltransferase TcmP K00599.
 
     0.534
EEZ61843.1
Methyltransferase domain protein; KEGG: pol:Bpro_0860 1.6e-14 ubiquinone/menaquinone biosynthesis methyltransferases K03183; Psort location: Cytoplasmic, score: 8.87.
  
     0.525
EEZ61872.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.440
EEZ61301.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.433
EEZ60724.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.431
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.