Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
EEZ60548.1Cytochrome C biogenesis protein transmembrane region; KEGG: rpa:RPA3812 7.7e-38 putative holocytochrome c synthase K06196; Psort location: CytoplasmicMembrane, score: 10.00. (410 aa)    
Predicted Functional Partners:
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 0.850
EEZ61439.1
Cytochrome c assembly protein; KEGG: gbe:GbCGDNIH1_0271 7.2e-19 heme chaperone heme-lyase; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.775
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
   0.745
EEZ61124.1
Rubrerythrin; KEGG: cpr:CPR_0938 4.6e-20 periplasmic [Fe] hydrogenase 1 K00532; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.624
trxA
Thioredoxin; KEGG: mbo:Mb3945 5.9e-24 trxC; thioredoxin TrxC (TRX) (MPT46) K03671; Psort location: Cytoplasmic, score: 9.98; Belongs to the thioredoxin family.
  
 
 0.605
cysK
Cysteine synthase A; KEGG: bfr:BF4576 2.4e-107 cysteine synthase A K01738; Psort location: Cytoplasmic, score: 8.87; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.604
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
  
 0.590
EEZ60547.1
Hypothetical protein.
       0.572
EEZ61739.1
Copper-exporting ATPase; KEGG: tde:TDE0008 1.5e-194 copper-translocating P-type ATPase K01533; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
 0.555
cobA
KEGG: mta:Moth_1248 3.1e-114 uroporphyrin-III C-methyltransferase K02302:K01719; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.554
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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