STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60560.1ThiF family protein; KEGG: aph:APH_1174 1.4e-18 thiF; adenylyltransferase ThiF; Psort location: Cytoplasmic, score: 8.87. (244 aa)    
Predicted Functional Partners:
EEZ60562.1
Hydrolase, TatD family; KEGG: atu:Atu5019 1.6e-28 putative Mg-dependent DNase K03424; Psort location: Cytoplasmic, score: 8.87.
     0.638
EEZ60559.1
Metallo-beta-lactamase domain protein; KEGG: rha:RHA1_ro01701 1.8e-20 beta lactamase K01467; Psort location: Cytoplasmic, score: 8.87.
       0.466
EEZ60886.1
KEGG: mac:MA0826 2.9e-63 hat; histone acetyltransferase, ELP3 family K07739; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.433
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.