STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60565.1KEGG: pen:PSEEN2498 5.8e-72 ABC transporter, permease/ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00. (598 aa)    
Predicted Functional Partners:
EEZ60564.1
KEGG: pen:PSEEN2497 6.3e-75 ABC transporter, permease/ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.841
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
  
 0.672
EEZ61785.1
AMP-binding enzyme; KEGG: rpb:RPB_0580 6.6e-15 AMP-dependent synthetase and ligase K01897; Psort location: Cytoplasmic, score: 8.87.
  
 0.666
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
 0.655
EEZ60566.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 2.1e-12 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; Psort location: Cytoplasmic, score: 8.87.
  
    0.527
EEZ61431.1
KEGG: lwe:lwe2133 2.5e-55 ABC transporter, ATP-binding protein K06020; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.474
EEZ61279.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
    
 0.471
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.