STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60586.1Hypothetical protein; KEGG: gme:Gmet_3535 3.0e-06 putative oxygen-independent coproporphyrinogen III oxidase K02495. (222 aa)    
Predicted Functional Partners:
EEZ61702.1
KEGG: ava:Ava_B0209 0.0013 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.644
EEZ60587.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.576
EEZ62236.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.26.
  
    0.506
EEZ60904.1
Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.506
EEZ60889.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00071 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.503
EEZ60585.1
LPXTG-motif cell wall anchor domain protein; KEGG: eci:UTI89_C1627 2.0e-14 entS; EntS/YbdA MFS transporter.
       0.483
EEZ60970.1
Oxidoreductase molybdopterin binding domain protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.450
EEZ61295.1
Hypothetical protein; KEGG: lpl:lp_3125 1.2e-11 fumarate reductase, flavoprotein subunit precursor, N-terminally truncated K00238; Psort location: Cytoplasmic, score: 8.87.
  
     0.442
EEZ62015.1
4Fe-4S binding domain protein; KEGG: mka:MK0307 4.3e-09 fwdF_1; probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing K00205; Psort location: Cytoplasmic, score: 8.87.
  
     0.436
EEZ60589.1
Von Willebrand factor type A domain protein.
     
 0.433
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.