STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60592.1Hypothetical protein; KEGG: eco:b0597 1.6e-07 ybdB; hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (150 aa)    
Predicted Functional Partners:
EEZ62082.1
KEGG: fnu:FN1542 3.8e-52 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.910
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.818
EEZ60593.1
RNA methyltransferase, TrmH family; KEGG: blo:BL0865 1.4e-68 tnsR; possible tRNA/rRNA methyltransferase K00599; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEZ60594.1
Hypothetical protein; KEGG: mag:amb0814 0.0074 NAD-dependent aldehyde dehydrogenase K00135; Psort location: Cytoplasmic, score: 8.87.
       0.746
EEZ61782.1
Condensation domain protein; KEGG: bur:Bcep18194_B0672 2.7e-28 non-ribosomal peptide synthetase modules K01776; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.577
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.540
EEZ60595.1
ACT domain protein; KEGG: nph:NP5006A 7.9e-09 purU; formyltetrahydrofolate deformylase K01433; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0237 family.
       0.507
EEZ61785.1
AMP-binding enzyme; KEGG: rpb:RPB_0580 6.6e-15 AMP-dependent synthetase and ligase K01897; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.467
EEZ60411.1
enoyl-CoA hydratase/isomerase family protein; KEGG: msm:MSMEG_5198 1.2e-46 carnitinyl-CoA dehydratase K01726; Psort location: Cytoplasmic, score: 8.87.
 
 0.443
EEZ60578.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.438
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.