STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60595.1ACT domain protein; KEGG: nph:NP5006A 7.9e-09 purU; formyltetrahydrofolate deformylase K01433; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0237 family. (90 aa)    
Predicted Functional Partners:
EEZ60594.1
Hypothetical protein; KEGG: mag:amb0814 0.0074 NAD-dependent aldehyde dehydrogenase K00135; Psort location: Cytoplasmic, score: 8.87.
 
     0.899
EEZ60596.1
Hypothetical protein.
       0.567
EEZ60597.1
Hypothetical protein.
       0.567
EEZ60592.1
Hypothetical protein; KEGG: eco:b0597 1.6e-07 ybdB; hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.507
EEZ60593.1
RNA methyltransferase, TrmH family; KEGG: blo:BL0865 1.4e-68 tnsR; possible tRNA/rRNA methyltransferase K00599; Psort location: Cytoplasmic, score: 8.87.
       0.507
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.493
sdaAA
L-serine dehydratase, iron-sulfur-dependent, alpha subunit; KEGG: tte:TTE1009 4.3e-60 sdaA2; L-serine deaminase K01752; Psort location: Cytoplasmic, score: 8.87; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.478
EEZ61403.1
KEGG: sfu:Sfum_2682 8.7e-62 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.98.
     
 0.456
EEZ61281.1
HAD hydrolase, family IB; KEGG: rha:RHA1_ro02056 2.3e-15 possible phosphoserine phosphatase K01079; Psort location: Cytoplasmic, score: 8.87.
     
 0.455
EEZ60993.1
KEGG: chy:CHY_1912 2.3e-93 hom; homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 8.87.
    
  0.441
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.