STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bkdAPyruvate dehydrogenase. (379 aa)    
Predicted Functional Partners:
L083_0092
Hypothetical protein.
 
 0.999
bkdB
Transketolase, central region.
 0.999
L083_1864
Dihydrolipoamide dehydrogenase.
 
 
 0.992
L083_1776
Transketolase domain-containing protein.
 
0.953
L083_1863
2-oxoglutarate dehydrogenase E2 component.
 
 0.944
aceE
Pyruvate dehydrogenase; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.940
porA
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
 0.938
sucA
Alpha-ketoglutarate decarboxylase.
 
 0.926
L083_3462
Formate acetyltransferase.
   
 
 0.923
pyk1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.916
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.