Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L083_0479 | L083_0481 | L083_0479 | L083_0481 | TetR family transcriptional regulator. | Integral membrane protein. | 0.542 |
L083_0479 | L083_0482 | L083_0479 | L083_0482 | TetR family transcriptional regulator. | ABC transporter-like protein. | 0.538 |
L083_0479 | L083_0483 | L083_0479 | L083_0483 | TetR family transcriptional regulator. | Hypothetical protein. | 0.538 |
L083_0479 | L083_0484 | L083_0479 | L083_0484 | TetR family transcriptional regulator. | Hypothetical protein. | 0.538 |
L083_0479 | sig4 | L083_0479 | L083_0480 | TetR family transcriptional regulator. | Sigma-70 family RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily. | 0.566 |
L083_0481 | L083_0479 | L083_0481 | L083_0479 | Integral membrane protein. | TetR family transcriptional regulator. | 0.542 |
L083_0481 | L083_0482 | L083_0481 | L083_0482 | Integral membrane protein. | ABC transporter-like protein. | 0.938 |
L083_0481 | L083_0483 | L083_0481 | L083_0483 | Integral membrane protein. | Hypothetical protein. | 0.787 |
L083_0481 | L083_0484 | L083_0481 | L083_0484 | Integral membrane protein. | Hypothetical protein. | 0.792 |
L083_0481 | L083_0485 | L083_0481 | L083_0485 | Integral membrane protein. | Hypothetical protein. | 0.437 |
L083_0481 | L083_0486 | L083_0481 | L083_0486 | Integral membrane protein. | Zn-dependent protease with chaperone function-like protein. | 0.437 |
L083_0481 | sig4 | L083_0481 | L083_0480 | Integral membrane protein. | Sigma-70 family RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily. | 0.914 |
L083_0482 | L083_0479 | L083_0482 | L083_0479 | ABC transporter-like protein. | TetR family transcriptional regulator. | 0.538 |
L083_0482 | L083_0481 | L083_0482 | L083_0481 | ABC transporter-like protein. | Integral membrane protein. | 0.938 |
L083_0482 | L083_0483 | L083_0482 | L083_0483 | ABC transporter-like protein. | Hypothetical protein. | 0.781 |
L083_0482 | L083_0484 | L083_0482 | L083_0484 | ABC transporter-like protein. | Hypothetical protein. | 0.791 |
L083_0482 | L083_0485 | L083_0482 | L083_0485 | ABC transporter-like protein. | Hypothetical protein. | 0.439 |
L083_0482 | L083_0486 | L083_0482 | L083_0486 | ABC transporter-like protein. | Zn-dependent protease with chaperone function-like protein. | 0.439 |
L083_0482 | sig4 | L083_0482 | L083_0480 | ABC transporter-like protein. | Sigma-70 family RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily. | 0.865 |
L083_0483 | L083_0479 | L083_0483 | L083_0479 | Hypothetical protein. | TetR family transcriptional regulator. | 0.538 |
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