STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
L083_1237Superfamily i DNA and RNA helicase and helicase subunits-like protein. (459 aa)    
Predicted Functional Partners:
L083_1231
Hypothetical protein.
 
     0.897
L083_1230
Secreted protein.
 
     0.871
L083_6092
Hypothetical protein.
 
    0.745
L083_3674
Hypothetical protein.
  
     0.687
L083_1396
Hypothetical protein.
  
     0.682
L083_5242
Hypothetical protein.
  
     0.679
L083_7817
Hypothetical protein.
  
    0.676
L083_4630
Transposase IS4 family protein.
  
     0.623
L083_1144
Hypothetical protein.
  
     0.620
L083_0890
Phage excisionase.
  
     0.583
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.