STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L083_1621Regulatory protein ArsR. (106 aa)    
Predicted Functional Partners:
L083_1620
Zinc uptake regulator; Belongs to the Fur family.
  
  
 0.915
scbA
Periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
     
 0.879
L083_1622
ABC-3 protein.
     
 0.878
mntB
ABC transporter.
     
 0.823
L083_1626
Hypothetical protein.
       0.782
L083_1625
Antibiotic biosynthesis monooxygenase.
       0.593
L083_1627
Hypothetical protein.
       0.500
L083_6335
ArsR family transcriptional regulator.
  
     0.479
L083_8047
ArsR family transcriptional regulator.
  
     0.460
glyS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.422
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.