STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L083_1663Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (341 aa)    
Predicted Functional Partners:
L083_1662
ABC transporter.
 0.993
L083_1664
Periplasmic binding protein/LacI transcriptional regulator.
 
 0.990
L083_5666
ABC transporter.
 
 0.951
L083_0576
ABC sugar transporter ATP-binding protein.
 
 0.852
L083_0577
ABC sugar transporter.
 
 0.849
L083_3774
ABC transporter ATP-binding protein.
 
 0.846
L083_3773
Periplasmic binding protein/LacI transcriptional regulator.
 
 0.826
L083_1661
Rok family protein.
  
    0.804
araG
D-xylose ABC transporter, ATP-binding protein.
 
 0.799
L083_3262
ABC transporter related protein.
 
 0.793
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.