STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L083_2659Hypothetical protein. (1039 aa)    
Predicted Functional Partners:
L083_2985
Aminotransferase.
 
 0.999
nrps1B
Glutamate-1-semialdehyde 2,1-aminomutase, Phenylalanine racemase (ATP-hydrolyzing).
 
 
0.999
L083_5573
Non-ribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.999
tycC
Amino acid adenylation domain-containing protein.
 
 
0.999
L083_2497
LipNrps.
 
 0.998
L083_3002
Condensation domain-containing protein.
 
 0.998
nrps2C
Amino acid adenylation domain protein.
 
 
0.998
L083_1488
Non-ribosomal peptide synthetase.
 
 
0.997
L083_2495
Polyketide synthase type I.
 
 
 0.997
L083_2894
Beta-ketoacyl synthase.
 
 
0.997
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.