STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L083_2666Hypothetical protein. (324 aa)    
Predicted Functional Partners:
L083_0568
Rhodanese domain-containing protein.
  
     0.759
L083_3669
Rhodanese domain-containing protein.
  
     0.731
L083_4517
Alpha-amylase.
  
     0.710
L083_6318
Glycosyl hydrolase family 88.
  
     0.703
L083_5805
Alpha amylase catalytic subunit.
  
     0.687
L083_3814
Ricin B lectin; Belongs to the glycosyl hydrolase 43 family.
  
     0.671
manC
Mannose-1-phosphate guanylyltransferase.
  
     0.618
L083_5389
Cellulose-binding protein.
  
     0.602
L083_1782
PHB depolymerase family esterase.
  
     0.600
L083_3497
Metalloprotease.
  
     0.583
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.