Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
L083_3003Short-chain dehydrogenase/reductase SDR. (266 aa)    
Predicted Functional Partners:
tycC
Amino acid adenylation domain-containing protein.
  
 0.903
L083_5573
Non-ribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.884
nrps1B
Glutamate-1-semialdehyde 2,1-aminomutase, Phenylalanine racemase (ATP-hydrolyzing).
  
 0.856
L083_2985
Aminotransferase.
  
 0.854
L083_2497
LipNrps.
  
 0.817
L083_2456
Polyketide synthase type I.
  
 0.816
L083_2455
Beta-ketoacyl synthase.
  
 0.805
L083_2457
Modular polyketide synthase.
  
 0.805
L083_2491
Acyl transferase.
  
 0.805
L083_2492
Modular polyketide synthase.
  
 0.805
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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