STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L083_3178Gluconolactonase. (336 aa)    
Predicted Functional Partners:
L083_2762
Orf33.
 
 
 0.914
L083_3251
Sugar kinase.
  
 
 0.905
L083_5179
Carbohydrate kinase; Belongs to the FGGY kinase family.
  
 
 0.905
xysA
Xylanase-arabinofuranosidase bifunctional enzyme.
 
     0.791
L083_3179
Glucose dehydrogenase.
     
 0.706
glcI
Secreted protein.
 
     0.579
L083_5673
Amidohydrolase.
 
     0.524
L083_5663
Amidohydrolase.
 
     0.519
gdhB
Quinoprotein glucose dehydrogenase.
    
 0.505
L083_5146
Hypothetical protein.
  
     0.488
Your Current Organism:
Actinoplanes sp. N902109
NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.